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In this section, have been grouped, the software used to build the primers using the Nearest-Neighbor thermodynamic parameters
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This section contains the software that analyze PCR products (amplicons)
and the software that analyze the oligonucleotide sequences and the primers sequences
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In this section are grouped the software related to the sequencing with the Sanger methods (analysis of primers and chromatograms)
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In this section there are various tools that help manipulate nucleotide sequences or create PCR reactions
This section contains applications related to the human genome and mRNA
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determines the chromosomal position from one genomic release to another (hg19, hg38 and hs1 )
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Human Genomics Sequence (hg19/hg38)(with variants)
(returns the sequence of a human genomic region with colored polymorphisms as a function of frequency)
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Aligns mRNA sequences (with variants) with genomic and protein from genomic o mRNA position
This section contains applications for analyzing genomic variants
Shows details of a human variant such as the biological effect, isoforms, any related diseases and Pubmed citations. Converts the descriptions of the human variants (genomics, mRNA and protein) in the forms HGVS, VCF and local.
It is also useful to convert and write correctly variants in HGVS format.
Appliation for analyze HLA alleles sequence
PriorVar (under testing) ");
(Management of genomic variants from human exome sequencing)
(Prioritization of genomic variants, contained in a VCF file, using functional consequence, customizable pathogenicity rancking score and LSDB Disease (currently only ClinVar))
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